Biobricks Ice: An Open Knowledge Graph for Cheminformatics and Chemical Safety

Schema Diagram

erDiagram
Bao0000015 {
    string dc_source  
    string rdfs_label  
    string niehs_assay_source  
    string niehs_assay_species  
    string niehs_throughMechanisticTarget  
    string niehs_assay_tissue  
    string niehs_assay_invitro_assay_format  
    string niehs_mayInformOn  
}
Bao0000040 {

}
Bao0000179 {
    string rdfs_label  
    string obo_ExO_0000055  
    string semsci_has_value  
    string semsci_has_unit  
}
Bao0003064 {

}
Cheminf000000 {
    string rdfs_label  
}
Cheminf000446 {
    string dc_source  
    string rdfs_label  
}
Cheminf000568 {
    string dc_source  
    string rdfs_label  
}
EdamData1027 {

}
EdamData1181 {

}

Bao0000015 ||--|o EdamData1027 : "niehs_assay_entrez_gene_id"
Bao0000015 ||--|o Bao0000040 : "bao_0000209"
Bao0000015 ||--|o EdamData1181 : "niehs_throughMechanisticTarget_NCIm"
Bao0000015 ||--|o EdamData1181 : "umls_C1708327"
Bao0000040 ||--|o Cheminf000000 : "obo_RO_0000057"
Bao0000040 ||--|o Bao0000179 : "obo_OBI_0000299"
Cheminf000000 ||--|o Cheminf000568 : "edam_has_identifier"
Cheminf000000 ||--|o Cheminf000446 : "edam_has_identifier"
Cheminf000000 ||--|o Bao0000040 : "obo_RO_0000056"

IRI prefixes

• bao: http://www.bioassayontology.org/bao#BAO_
• cheminf: http://purl.obolibrary.org/obo/CHEMINF_
• dc: http://purl.org/dc/elements/1.1/
• edam: http://edamontology.org/
• linkml: https://w3id.org/linkml/
• niehs: https://ice.ntp.niehs.nih.gov/property/
• obo: http://purl.obolibrary.org/obo/
• rdf: http://www.w3.org/1999/02/22-rdf-syntax-ns#
• rdfs: http://www.w3.org/2000/01/rdf-schema#
• semsci: http://semanticscience.org/resource/SIO_
• umls: https://identifiers.org/umls:

Classes

Slots