SPOKE: Connecting Biomedical information on Earth and in Space via the SPOKE knowledge graph

Schema Diagram

erDiagram
Neo4jCompound {
    string neo4j_identifier  
    string neo4j_name  
    string neo4j_sources  
}
Neo4jDisease {
    string neo4j_identifier  
    string neo4j_source  
    string neo4j_name  
}
Neo4jEnvironment {
    string neo4j_identifier  
    string neo4j_name  
    string neo4j_sources  
}
Neo4jLocation {
    string neo4j_name  
    string neo4j_identifier  
    string neo4j_sources  
}
Neo4jOrganism {
    string neo4j_identifier  
    string neo4j_name  
    string neo4j_sources  
}
Neo4jSDoH {
    string neo4j_identifier  
    string neo4j_name  
    string neo4j_sources  
}

Neo4jCompound ||--|o Neo4jCompound : "neo4j_INTERACTS_CiC"
Neo4jCompound ||--|o Neo4jDisease : "neo4j_CONTRAINDICATES_CcD"
Neo4jCompound ||--|o Neo4jDisease : "neo4j_TREATS_CtD"
Neo4jCompound ||--|o Neo4jCompound : "neo4j_PARTOF_CpC"
Neo4jCompound ||--|o Neo4jCompound : "neo4j_HASROLE_ChC"
Neo4jCompound ||--|o Neo4jLocation : "neo4j_FOUNDIN_CfL"
Neo4jCompound ||--|o Neo4jCompound : "neo4j_ISA_CiC"
Neo4jDisease ||--|o Neo4jLocation : "neo4j_MORTALITY_DmL"
Neo4jDisease ||--|o Neo4jLocation : "neo4j_PREVALENCE_DpL"
Neo4jDisease ||--|o Neo4jDisease : "neo4j_RESEMBLES_DrD"
Neo4jDisease ||--|o Neo4jDisease : "neo4j_ISA_DiD"
Neo4jEnvironment ||--|o Neo4jEnvironment : "neo4j_ISA_EiE"
Neo4jEnvironment ||--|o Neo4jLocation : "neo4j_FOUNDIN_EfL"
Neo4jLocation ||--|o Neo4jLocation : "neo4j_PARTOF_LpL"
Neo4jOrganism ||--|o Neo4jLocation : "neo4j_ISOLATEDIN_OiL"
Neo4jOrganism ||--|o Neo4jCompound : "neo4j_RESPONDS_TO_OrC"
Neo4jSDoH ||--|o Neo4jSDoH : "neo4j_ISA_SiS"
Neo4jSDoH ||--|o Neo4jDisease : "neo4j_ASSOCIATES_SaD"
Neo4jSDoH ||--|o Neo4jLocation : "neo4j_PREVALENCEIN_SpL"

IRI prefixes

• linkml: https://w3id.org/linkml/
• neo4j: neo4j://graph.schema#
• rdf: http://www.w3.org/1999/02/22-rdf-syntax-ns#

Classes

Slots